Source code for neuroconv.datainterfaces.ecephys.biocam.biocamdatainterface
import warnings
from pydantic import FilePath
from ..baserecordingextractorinterface import BaseRecordingExtractorInterface
[docs]
class BiocamRecordingInterface(BaseRecordingExtractorInterface):
"""
Primary data interface class for converting Biocam data.
Uses the :py:func:`~spikeinterface.extractors.read_biocam` reader from SpikeInterface.
"""
display_name = "Biocam Recording"
associated_suffixes = (".bwr",)
info = "Interface for Biocam recording data."
[docs]
@classmethod
def get_source_schema(cls) -> dict:
schema = super().get_source_schema()
schema["properties"]["file_path"]["description"] = "Path to the .bwr file."
return schema
def __init__(
self, file_path: FilePath, *args, verbose: bool = False, es_key: str = "ElectricalSeries"
): # TODO: change to * (keyword only) on or after August 2026
"""
Load and prepare data for Biocam.
Parameters
----------
file_path : string or Path
Path to the .bwr file.
verbose : bool, default: False
Allows verbose.
es_key: str, default: "ElectricalSeries"
"""
# Handle deprecated positional arguments
if args:
parameter_names = [
"verbose",
"es_key",
]
num_positional_args_before_args = 1 # file_path
if len(args) > len(parameter_names):
raise TypeError(
f"__init__() takes at most {len(parameter_names) + num_positional_args_before_args + 1} positional arguments but "
f"{len(args) + num_positional_args_before_args + 1} were given. "
"Note: Positional arguments are deprecated and will be removed on or after August 2026. "
"Please use keyword arguments."
)
positional_values = dict(zip(parameter_names, args))
passed_as_positional = list(positional_values.keys())
warnings.warn(
f"Passing arguments positionally to BiocamRecordingInterface.__init__() is deprecated "
f"and will be removed on or after August 2026. "
f"The following arguments were passed positionally: {passed_as_positional}. "
"Please use keyword arguments instead.",
FutureWarning,
stacklevel=2,
)
verbose = positional_values.get("verbose", verbose)
es_key = positional_values.get("es_key", es_key)
super().__init__(file_path=file_path, verbose=verbose, es_key=es_key)